STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prhJTranscription regulator prhj transcription regulator protein. (174 aa)    
Predicted Functional Partners:
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
     
 0.896
prhI
3-compartiment signal transduction system, sigma factor prhi transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.895
prhA
Outer membrane receptor prha signal peptide protein.
      
 0.828
hrpG
Response regulator transcription regulator protein.
    
 
 0.759
RSp0285
Probable transcription regulator protein.
  
     0.717
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.711
RSc1185
Probable transcription regulator protein.
  
     0.705
hrpB
Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium.
   
  
 0.676
epsR
Negative regulator of exopolysaccharide production transcription regulator protein.
  
     0.670
RSc3161
Probable two component response regulator transcription regulator protein.
  
     0.665
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.