Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dusA | hrcC | RSc1299 | RSp0874 | Putative trna-dihydrouridine synthase protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | 0.459 |
| dusA | hrpZ | RSc1299 | RSp0854 | Putative trna-dihydrouridine synthase protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Probable hrpy-related protein. | 0.732 |
| hpaB | hrcC | RSp0853 | RSp0874 | Hypothetical tir chaperone-like protein. | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | 0.660 |
| hpaB | hrcV | RSp0853 | RSp0863 | Hypothetical tir chaperone-like protein. | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.806 |
| hpaB | hrpZ | RSp0853 | RSp0854 | Hypothetical tir chaperone-like protein. | Probable hrpy-related protein. | 0.645 |
| hrcC | dusA | RSp0874 | RSc1299 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Putative trna-dihydrouridine synthase protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | 0.459 |
| hrcC | hpaB | RSp0874 | RSp0853 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hypothetical tir chaperone-like protein. | 0.660 |
| hrcC | hrcV | RSp0874 | RSp0863 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.936 |
| hrcC | hrpD | RSp0874 | RSp0871 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrpd protein. | 0.564 |
| hrcC | hrpF | RSp0874 | RSp0869 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrpf protein. | 0.622 |
| hrcC | hrpW | RSp0874 | RSp0857 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrpw transmembrane protein. | 0.571 |
| hrcC | hrpZ | RSp0874 | RSp0854 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Probable hrpy-related protein. | 0.578 |
| hrcV | hpaB | RSp0863 | RSp0853 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hypothetical tir chaperone-like protein. | 0.806 |
| hrcV | hrcC | RSp0863 | RSp0874 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | 0.936 |
| hrcV | hrpD | RSp0863 | RSp0871 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrpd protein. | 0.598 |
| hrcV | hrpF | RSp0863 | RSp0869 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrpf protein. | 0.784 |
| hrcV | hrpH | RSp0863 | RSp0868 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrph protein. | 0.407 |
| hrcV | hrpW | RSp0863 | RSp0857 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrpw transmembrane protein. | 0.955 |
| hrcV | hrpX | RSp0863 | RSp0856 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrpx protein. | 0.707 |
| hrcV | hrpY | RSp0863 | RSp0855 | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Hrp pilus subunit hrpy protein. | 0.417 |
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