STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpVHrpv protein. (333 aa)    
Predicted Functional Partners:
hrcQ
Hrp conserved protein hrcq.
     
 0.865
hrcR
Hrp conserved hrcr transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FliP/MopC/SpaP family.
     
 0.853
hpaP
Hrp associated protein.hpap.
     
 0.823
hrcS
Hrp conserved hrcs transmembrane protein.
     
 0.812
hrpX
Hrpx protein.
     
 0.782
hrpW
Hrpw transmembrane protein.
       0.773
hrcU
Hrp conserved hrcu transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the type III secretion exporter family.
     
 0.739
hrcV
Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.726
hrpY
Hrp pilus subunit hrpy protein.
     
 0.684
hrpJ
Hrpj protein.
     
 0.577
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.