STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpKHrpk protein. (158 aa)    
Predicted Functional Partners:
hrpF
Hrpf protein.
     
 0.827
hrpJ
Hrpj protein.
     
 0.822
hrcT
Hrp conserved hrct transmembrane protein.
     
 0.821
hrcJ
Hrp conserved lipoprotein hrcj transmembrane.
     
 0.745
hrpH
Hrph protein.
     
 0.744
hrcN
Hrp conserved protein hrcn.
     
 0.723
hrpD
Hrpd protein.
       0.709
hrpW
Hrpw transmembrane protein.
     
 0.678
hrpY
Hrp pilus subunit hrpy protein.
     
 0.587
hrpB
Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium.
     
 0.573
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.