STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpJHrpj protein. (128 aa)    
Predicted Functional Partners:
hrpH
Hrph protein.
     
 0.901
hrpD
Hrpd protein.
     
 0.850
hrcJ
Hrp conserved lipoprotein hrcj transmembrane.
     
 0.825
hrpK
Hrpk protein.
     
 0.785
hrpF
Hrpf protein.
     
 0.783
hrcN
Hrp conserved protein hrcn.
     
 0.780
hrcT
Hrp conserved hrct transmembrane protein.
     
 0.765
hrcU
Hrp conserved hrcu transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the type III secretion exporter family.
     
 0.656
hrpW
Hrpw transmembrane protein.
     
 0.637
hpaP
Hrp associated protein.hpap.
     
 0.605
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.