STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpHHrph protein. (209 aa)    
Predicted Functional Partners:
hrpJ
Hrpj protein.
     
 0.901
hrpF
Hrpf protein.
     
 0.884
hrpD
Hrpd protein.
     
 0.854
hrcJ
Hrp conserved lipoprotein hrcj transmembrane.
     
 0.831
hrcN
Hrp conserved protein hrcn.
       0.777
hrcT
Hrp conserved hrct transmembrane protein.
     
 0.771
hrpW
Hrpw transmembrane protein.
     
 0.770
hrpK
Hrpk protein.
     
 0.730
hrpX
Hrpx protein.
     
 0.675
hrpY
Hrp pilus subunit hrpy protein.
     
 0.638
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.