STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpBRegulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium. (477 aa)    
Predicted Functional Partners:
hrcC
Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane.
 
   
 0.891
hrpG
Response regulator transcription regulator protein.
 
   
 0.868
pglA
Polygalacturonase precursor (pga) (pectinase). signal peptide protein; Contributes to the wilt disease production on tomato; Belongs to the glycosyl hydrolase 28 family.
  
   
 0.774
hrcS
Hrp conserved hrcs transmembrane protein.
 
     0.761
hrpF
Hrpf protein.
  
  
 0.755
phcA
HTH-type transcriptional regulator PhcA; Regulates the transcription of one or more of the genes involved in virulence.
   
  
 0.752
egl
Endoglucanase precursor (endo-1,4-beta-glucanase)(cellulase) protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.747
hrcJ
Hrp conserved lipoprotein hrcj transmembrane.
 
  
 0.741
hrcT
Hrp conserved hrct transmembrane protein.
 
     0.734
prhA
Outer membrane receptor prha signal peptide protein.
      
 0.720
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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