Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gspC | hrcC | RSc3105 | RSp0874 | Putative general secretion pathway related transmembrane protein. | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | 0.817 |
| hrcC | gspC | RSp0874 | RSc3105 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Putative general secretion pathway related transmembrane protein. | 0.817 |
| hrcC | hrcJ | RSp0874 | RSp0867 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved lipoprotein hrcj transmembrane. | 0.990 |
| hrcC | hrcN | RSp0874 | RSp0870 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved protein hrcn. | 0.872 |
| hrcC | hrcQ | RSp0874 | RSp0861 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved protein hrcq. | 0.827 |
| hrcC | hrcR | RSp0874 | RSp0860 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrcr transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FliP/MopC/SpaP family. | 0.949 |
| hrcC | hrcS | RSp0874 | RSp0859 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrcs transmembrane protein. | 0.977 |
| hrcC | hrcT | RSp0874 | RSp0872 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrct transmembrane protein. | 0.985 |
| hrcC | hrcU | RSp0874 | RSp0864 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrcu transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the type III secretion exporter family. | 0.811 |
| hrcC | hrcV | RSp0874 | RSp0863 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.936 |
| hrcC | hrpB | RSp0874 | RSp0873 | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium. | 0.879 |
| hrcJ | hrcC | RSp0867 | RSp0874 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane. | 0.990 |
| hrcJ | hrcN | RSp0867 | RSp0870 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved protein hrcn. | 0.986 |
| hrcJ | hrcQ | RSp0867 | RSp0861 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved protein hrcq. | 0.898 |
| hrcJ | hrcR | RSp0867 | RSp0860 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrcr transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FliP/MopC/SpaP family. | 0.996 |
| hrcJ | hrcS | RSp0867 | RSp0859 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrcs transmembrane protein. | 0.997 |
| hrcJ | hrcT | RSp0867 | RSp0872 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrct transmembrane protein. | 0.998 |
| hrcJ | hrcU | RSp0867 | RSp0864 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrcu transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the type III secretion exporter family. | 0.924 |
| hrcJ | hrcV | RSp0867 | RSp0863 | Hrp conserved lipoprotein hrcj transmembrane. | Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.995 |
| hrcJ | hrpB | RSp0867 | RSp0873 | Hrp conserved lipoprotein hrcj transmembrane. | Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium. | 0.741 |
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