STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prhAOuter membrane receptor prha signal peptide protein. (770 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
 
  
 0.949
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
 
 
 0.937
prhI
3-compartiment signal transduction system, sigma factor prhi transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.847
RSc2919
Putative iron transport-sensory transduction transmembrane protein.
 
 
 0.838
prhJ
Transcription regulator prhj transcription regulator protein.
      
 0.758
hrpB
Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium.
      
 0.733
hrpG
Response regulator transcription regulator protein.
      
 0.730
RSp0414
Probable ferric siderophore receptor protein.
 
  
 0.701
RSc1807
Putative siderophore receptor protein.
  
  
 0.673
phcA
HTH-type transcriptional regulator PhcA; Regulates the transcription of one or more of the genes involved in virulence.
      
 0.617
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.