STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSp0892Putative hydratase/decarboxylase; protein. (263 aa)    
Predicted Functional Partners:
dmpI
Probable tautomerase protein; Belongs to the 4-oxalocrotonate tautomerase family.
 
  
 0.991
dmpF
Probable acetaldehyde dehydrogenase oxidoreductase protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.985
RSp0891
Putative hydratase/decarboxylase; protein.
 
  
 
0.981
dmpG
Probable 4-hydroxy-2-oxovalerate aldolase protein; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
  
 0.957
cmtC
Probable 2,3-dihydroxy-p-cumate-3,4-dioxygenase oxidoreductase protein.
 
   
 0.934
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
 
  
 0.929
RSp1645
Putative 4-oxalocrotonate tautomerase protein.
    
 0.918
RSp1151
Putative 4-oxalocrotonate tautomerase homolog protein.
    
 0.907
dmpC
2-hydroxymuconic semialdehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
 
  
 0.889
cmtD
Probable hcomoda decarboxylase protein.
 
     0.786
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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