STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0902Putative integrase/recombinase protein; Belongs to the 'phage' integrase family. (566 aa)    
Predicted Functional Partners:
parB
Putative partitioning protein; Belongs to the ParB family.
  
  
 0.617
RSc1400
Putative transmembrane protein.
  
     0.597
RSp0901
Hypothetical protein; Miscellaneous; unknown.
       0.572
RSp0803
Putative hemagglutinin-related signal peptide protein.
  
    0.542
RSc2109
Probable transmembrane protein.
  
     0.541
RSc0097
Putative alkaline phosphatase lipoprotein transmembrane; Belongs to the alkaline phosphatase family.
  
     0.517
RSp0611
Probable transmembrane protein.
 
     0.505
parA
Probable partition protein.
 
   
 0.499
RSc0188
Putative zinc finger, dksa/trar c4-type protein.
 
  
 0.489
RSc3278
Probable transcription regulator protein.
 
    0.469
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.