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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0913Putative oxidoreductase, n-terminal; protein. (376 aa)    
Predicted Functional Partners:
iolD
Putative acetolactate synthase protein; Belongs to the TPP enzyme family.
 
  
 0.759
iolB
Putative myo-inositol catabolism protein.
 
  
 0.757
RSc1247
Probable sugar phosphate isomerases/epimerases protein.
 
  
 0.609
iolC
Probable transferase kinase protein.
 
  
 0.576
iolE
Putative myo-inositol catabolism protein.
 
  
 0.554
RSp0914
Lrr-gala family type III effector protein (gala 1).
 
     0.551
iolH
Putative protein implicated in myo-inositol catabolique pathway.
 
  
 0.539
lysS
Putative lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.523
RSp1400
Probable 4-hydroxyphenylpyruvate dioxygenase-related protein.
  
  
 0.508
scrK
Probable fructokinase protein.
 
  
 0.505
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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