STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0915Hypothetical protein; Elements of external origin; transposon-related functions. (42 aa)    
Predicted Functional Partners:
RSc1929
Probable tail completion-like protein.
   
    0.561
RSc1938
Probable bacteriophage protein.
   
    0.561
RSc1913
Probable phage-related tail protein.
   
    0.516
RSc1937
Probable bacteriophage protein.
   
    0.511
RSc1935
Probable bacteriophage protein.
   
    0.510
RSc1940
Probable terminase (atpase subunit) related protein.
   
    0.505
RSc1941
Probable bacteriophage protein.
   
    0.504
RSc1928
Probable tail completion-like protein.
   
    0.502
RSc1916
Probable phage-related protein.
   
    0.495
RSc1936
Probable bacteriophage protein.
   
    0.480
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.