STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0924Hypothetical protein; Miscellaneous; unknown. (283 aa)    
Predicted Functional Partners:
RSp1007
Putative acetyl transferase protein.
      
 0.638
RSp1012
Probable trimeric lpxa-like transferase protein.
      
 0.638
RSp0161
Putative transmembrane protein.
      
 0.637
RSc0818
Putative endoglucanase c-terminal domain harboring protein.
      
 0.631
RSp0923
Hypothetical protein; Miscellaneous; unknown.
       0.566
RSp0275
Putative glycosyl hydrolase family 18 with carbohydrate binding domain transmembrane protein.
      
 0.550
pme
Pectinesterase precursor (pectin methylesterase) (pe). transmembrane protein; Involved in maceration and soft-rotting of plant tissue. Belongs to the pectinesterase family.
      
 0.460
RSp0925
Putative signal peptide protein.
       0.406
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.