STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSp0946Putative gluconate kinase protein. (156 aa)    
Predicted Functional Partners:
RSp0945
Probable dehydrogenase oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.976
gntK
Probable thermoresistant gluconokinase (gluconate kinase 2) protein.
  
  
 
0.927
edd
Probable phosphogluconate dehydratase oxidoreductase protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.922
pgl
Probable 6-phosphogluconolactonase oxidoreductase protein; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.921
RSp0824
Putative gluconolactonase (d-glucono-delta-lactone lactonohydrolase) protein.
    
 0.911
RSc1034
Hypothetical oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.902
RSc0049
Probable 3-carboxymuconate cyclase protein.
     
  0.900
RSp0183
Probable 3-carboxymuconate cyclase protein.
     
  0.900
idnO
Probable gluconate 5-dehydrogenase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.803
idnD
Putative l-idonate 5-dehydrogenase oxidoreductase protein.
  
  
 0.745
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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