STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idnDPutative l-idonate 5-dehydrogenase oxidoreductase protein. (344 aa)    
Predicted Functional Partners:
idnO
Probable gluconate 5-dehydrogenase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.938
RSp0945
Probable dehydrogenase oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.775
RSp0946
Putative gluconate kinase protein.
  
  
 0.749
pntAa2
Probable nad(p) transhydrogenase (alpha subunit part 1) oxidoreductase protein.
  
  
 0.602
pntAb2
Probable transmembrane nad(p) transhydrogenase (alpha subunit part 2) transmembrane protein.
  
    0.591
pntB2a
Probable nad(p) transhydrogenase subunit beta (part 1) transmembrane protein.
       0.588
kbl
Probable 2-amino-3-ketobutyrate coenzyme a ligase protein; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 0.588
RSp0944
Probable transferase protein.
       0.572
aatA2
Probable aspartate aminotransferase a protein.
  
  
 0.533
bioF
Probable 8-amino-7-oxononanoate synthase protein; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
 
  
 0.513
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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