STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0958Probable hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (223 aa)    
Predicted Functional Partners:
RSc3398
Probable flavohemoprotein (hemoglobin-like) transmembrane; Belongs to the globin family.
  
  
 0.971
norB
Probable nitric oxide reductase (subunit b) transmembrane protein.
  
 0.750
RSp0959
Probable sigma-54 interacting transcription regulator protein.
 
     0.687
RSc3397
Putative of unknown function upf0074; transcription regulator protein.
 
  
 0.475
RSp0063
Probable ferredoxin oxidoreductase protein.
  
  
 0.447
vanB
Probable vanillate o-demethylase (vanillate degradation ferredoxin-like) oxidoreductase protein.
  
  
 0.447
paaE
Probable ferredoxin reductase protein.
  
  
 0.447
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.409
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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