STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdGPutative ribonucleotide reductase activating transmembrane protein. (246 aa)    
Predicted Functional Partners:
nrdD
Putative ribonucleotide reductase oxidoreductase protein.
 
  
 0.967
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.924
RSp0964
Miscellaneous; hypothetical/partial homology.
 
  
 0.834
RSp0966
Probable transcription regulator protein.
     
 0.785
gbd2
Putative nad-dependent 4-hyddoxybutyrate dehydrogenase oxidoreductase protein.
 
  
 0.608
nrdB
Putative transmembrane ribonucleoside reductase (small chain) oxidoreductase protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
     
 0.593
gbd1
Probable nad-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein.
  
  
 0.555
nrdA
Putative ribonucleoside reductase 1 (large chain) oxidoreductase protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
  
 0.520
RSp0969
Putative peptidase u32; protein.
 
    0.503
maeB1
Putative nadp-dependent malic enzyme oxidoreductase protein.
  
  
 0.483
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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