STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdGPutative ribonucleotide reductase activating transmembrane protein. (246 aa)    
Predicted Functional Partners:
nrdD
Putative ribonucleotide reductase oxidoreductase protein.
 
  
 0.974
RSp0964
Miscellaneous; hypothetical/partial homology.
 
  
 0.861
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.846
RSp0966
Probable transcription regulator protein.
     
 0.783
gbd2
Putative nad-dependent 4-hyddoxybutyrate dehydrogenase oxidoreductase protein.
 
  
 0.618
nrdA
Putative ribonucleoside reductase 1 (large chain) oxidoreductase protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
  
 0.595
gbd1
Probable nad-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein.
  
  
 0.567
nrdB
Putative transmembrane ribonucleoside reductase (small chain) oxidoreductase protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
     
 0.558
cobB
Probable cobyrinic acid a,c-diamide synthase protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
   
  
 0.520
RSp1220
Probable flavoprotein fad oxidoreductase.
  
  
 0.508
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.