STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0968Putative lipid carrier protein sterol-binding protein. (143 aa)    
Predicted Functional Partners:
RSp0969
Putative peptidase u32; protein.
 
  
 0.986
RSp0970
Probable peptidase u32; protein.
 
  
 0.964
RSp0967
Putative lipoprotein cog4273, uncharacterized conserved protein.
 
    0.896
RSp0971
Probable transmembrane protein.
 
     0.875
narX
Putative transmembrane nitrate/nitrite sensor kinase transcription regulator protein.
 
     0.729
cheZ2
Probable chemotaxis protein chez; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.535
cheZ1
Probable chemotaxis protein chez; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.533
narJ
Putative respiratory nitrate reductase oxidoreductase protein.
 
    0.489
RSp1626
Putative n-acetyltransferase protein.
  
  
 0.460
narI
Probable respiratory nitrate reductase transmembrane protein.
 
    0.456
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.