STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0970Probable peptidase u32; protein. (339 aa)    
Predicted Functional Partners:
RSp0969
Putative peptidase u32; protein.
 
 0.995
RSp0968
Putative lipid carrier protein sterol-binding protein.
 
  
 0.964
RSp0967
Putative lipoprotein cog4273, uncharacterized conserved protein.
 
    0.839
RSp0971
Probable transmembrane protein.
 
    0.764
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
 
    0.590
RSc3399
Probable transmembrane protein.
 
    0.552
nosL
Probable nosl lipoprotein.
 
    0.539
narX
Putative transmembrane nitrate/nitrite sensor kinase transcription regulator protein.
 
    0.530
nosD
Probable periplasmic copper-binding nosd signal peptide protein.
 
    0.519
nosZ
Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
  
    0.518
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.