STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0971Probable transmembrane protein. (406 aa)    
Predicted Functional Partners:
RSp0992
Probable signal peptide protein.
 
 
 0.889
RSp0968
Putative lipid carrier protein sterol-binding protein.
 
     0.875
RSc1277
Probable cytochrome c oxidase (subunit II) transmembrane protein.
  
 
 0.874
RSp0969
Putative peptidase u32; protein.
 
    0.802
RSp0970
Probable peptidase u32; protein.
 
    0.764
RSp1503
Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family.
  
 
 0.743
RSc1278
Probable cog4736, cbb3-type cytochrome oxidase, subunit 3 oxidoreductase protein.
  
  
 0.727
RSp0967
Putative lipoprotein cog4273, uncharacterized conserved protein.
 
    0.709
coxB
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.699
copC
Probable copper resistance c signal peptide protein.
  
     0.685
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.