Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSp1220 | RSp1223 | RSp1220 | RSp1223 | Probable flavoprotein fad oxidoreductase. | Probable high affinity nitrate transporter transmembrane protein. | 0.993 |
RSp1220 | RSp1503 | RSp1220 | RSp1503 | Probable flavoprotein fad oxidoreductase. | Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family. | 0.913 |
RSp1220 | narG | RSp1220 | RSp0974 | Probable flavoprotein fad oxidoreductase. | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.970 |
RSp1220 | narH | RSp1220 | RSp0975 | Probable flavoprotein fad oxidoreductase. | Probable respiratory nitrate reductase oxidoreductase protein. | 0.945 |
RSp1220 | narI | RSp1220 | RSp0977 | Probable flavoprotein fad oxidoreductase. | Probable respiratory nitrate reductase transmembrane protein. | 0.931 |
RSp1220 | narK1 | RSp1220 | RSp0972 | Probable flavoprotein fad oxidoreductase. | Putative nitrite/nitrate transporter transmembrane protein. | 0.939 |
RSp1220 | narK2 | RSp1220 | RSp0973 | Probable flavoprotein fad oxidoreductase. | Probable nitrite/nitrate transporter transmembrane protein. | 0.921 |
RSp1220 | nirB | RSp1220 | RSp1222 | Probable flavoprotein fad oxidoreductase. | Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.977 |
RSp1220 | nirD | RSp1220 | RSp1221 | Probable flavoprotein fad oxidoreductase. | Probable nitrite reductase nadph (small subunit) oxidoreductase protein. | 0.999 |
RSp1223 | RSp1220 | RSp1223 | RSp1220 | Probable high affinity nitrate transporter transmembrane protein. | Probable flavoprotein fad oxidoreductase. | 0.993 |
RSp1223 | RSp1503 | RSp1223 | RSp1503 | Probable high affinity nitrate transporter transmembrane protein. | Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family. | 0.918 |
RSp1223 | narG | RSp1223 | RSp0974 | Probable high affinity nitrate transporter transmembrane protein. | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.975 |
RSp1223 | narH | RSp1223 | RSp0975 | Probable high affinity nitrate transporter transmembrane protein. | Probable respiratory nitrate reductase oxidoreductase protein. | 0.965 |
RSp1223 | narI | RSp1223 | RSp0977 | Probable high affinity nitrate transporter transmembrane protein. | Probable respiratory nitrate reductase transmembrane protein. | 0.960 |
RSp1223 | narJ | RSp1223 | RSp0976 | Probable high affinity nitrate transporter transmembrane protein. | Putative respiratory nitrate reductase oxidoreductase protein. | 0.682 |
RSp1223 | narK1 | RSp1223 | RSp0972 | Probable high affinity nitrate transporter transmembrane protein. | Putative nitrite/nitrate transporter transmembrane protein. | 0.919 |
RSp1223 | narK2 | RSp1223 | RSp0973 | Probable high affinity nitrate transporter transmembrane protein. | Probable nitrite/nitrate transporter transmembrane protein. | 0.914 |
RSp1223 | nirB | RSp1223 | RSp1222 | Probable high affinity nitrate transporter transmembrane protein. | Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.997 |
RSp1223 | nirD | RSp1223 | RSp1221 | Probable high affinity nitrate transporter transmembrane protein. | Probable nitrite reductase nadph (small subunit) oxidoreductase protein. | 0.992 |
RSp1503 | RSp1220 | RSp1503 | RSp1220 | Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family. | Probable flavoprotein fad oxidoreductase. | 0.913 |
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