STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narXPutative transmembrane nitrate/nitrite sensor kinase transcription regulator protein. (637 aa)    
Predicted Functional Partners:
narL
Probable nitrate/nitrite response regulator transcription regulator protein.
 0.999
narJ
Putative respiratory nitrate reductase oxidoreductase protein.
 
   
 0.874
vsrD
Response regulator transcription regulator protein.
 
 
 0.809
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.806
narK1
Putative nitrite/nitrate transporter transmembrane protein.
  
 0.791
narI
Probable respiratory nitrate reductase transmembrane protein.
 
  
 0.745
RSp0968
Putative lipid carrier protein sterol-binding protein.
 
     0.729
RSc1185
Probable transcription regulator protein.
 
 
 0.717
RSc3161
Probable two component response regulator transcription regulator protein.
 
 
 0.717
RSp0285
Probable transcription regulator protein.
 
 
 0.713
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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