STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
gbd2Putative nad-dependent 4-hyddoxybutyrate dehydrogenase oxidoreductase protein. (382 aa)    
Predicted Functional Partners:
gabD1
Probable succinate-semialdehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
 
 0.927
gabD2
Probable succinate-semialdehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
 
 0.925
goaG
Probable 4-aminobutyrate aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.908
gbd1
Probable nad-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein.
  
  
 
0.901
nrdG
Putative ribonucleotide reductase activating transmembrane protein.
 
  
 0.618
glgA
Probable glycogen synthase protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.600
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.551
RSc0587
Hypothetical transmembrane protein.
    
 
 0.507
adhC2
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 
 0.507
adhC1
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 
 0.507
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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