STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tek2Probable tek-related protein. (566 aa)    
Predicted Functional Partners:
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
    
 
 0.763
RSp1469
Probable tyrosine phosphatase protein.
   
 
 0.759
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
    
   0.728
RSc2434
Putative reductase oxidoreductase protein.
    
   0.728
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.696
nuoH
Probable transmembrane nadh dehydrogenaseI(chain h) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
    
 
 0.686
RSc1806
Probable polyketide synthase protein.
    
 
 0.662
nuoA
Probable transmembrane nadh dehydrogenaseI(chain a) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
    
   0.657
RSp0216
Putative type III effector protein (serine/threonine-protein kinase).
   
 0.577
RSc1810
Probable polyketide synthase protein.
    
 
 0.576
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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