STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tek2Probable tek-related protein. (566 aa)    
Predicted Functional Partners:
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
    
 
 0.820
RSp1469
Probable tyrosine phosphatase protein.
   
 
 0.812
RSc2653
Probable protease signal peptide protein.
   
 
 0.574
RSc2654
Probable serine protease protein; Belongs to the peptidase S8 family.
   
 
 0.574
RSp0603
Probable serine protease protein.
   
 
 0.574
RSp0113
Probable sulphate transporter; transmembrane protein.
    
   0.569
RSp1519
Putative sulfate transporter transmembrane protein.
    
   0.569
RSp0999
Hypothetical protein; Miscellaneous; unknown.
       0.556
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
   
 
 0.541
RSc2434
Putative reductase oxidoreductase protein.
   
 
 0.541
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.