STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpsRTranscription regulator xpsr transcription regulator protein. (306 aa)    
Predicted Functional Partners:
phcA
HTH-type transcriptional regulator PhcA; Regulates the transcription of one or more of the genes involved in virulence.
      
 0.732
vsrC
Response regulator vsrc transcription regulator protein.
      
 0.619
vsrD
Response regulator transcription regulator protein.
      
 0.618
vsrA
Transmembrane sensor kinase vsra transcription regulator protein.
      
 0.586
phcB
Regulatory protein.
      
 0.531
hrpG
Response regulator transcription regulator protein.
      
 0.530
prhI
3-compartiment signal transduction system, sigma factor prhi transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
      
 0.529
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
      
 0.526
pilE2
Probable type 4 fimbrial biogenesis transmembrane protein.
      
 0.520
epsR
Negative regulator of exopolysaccharide production transcription regulator protein.
      
 0.499
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.