STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1026Probable signal peptide protein. (366 aa)    
Predicted Functional Partners:
RSc1015
Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.912
RSc1017
Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.
  
  
  0.911
RSc1016
Probable ribose abc transporter, atp-binding abc transporter protein.
  
 0.908
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
  
 
 0.902
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.874
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.874
RSp1178
Probable composite two-component transcriptional regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.860
RSp0786
Probable cog0332, 3-oxoacyl-[acyl-carrier-protein].
  
     0.624
RSc1351
Putative transmembrane sensor histidine kinase transcription regulator protein.
  
 
 0.596
RSc1243
Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.578
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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