STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1034Probable signal peptide protein. (89 aa)    
Predicted Functional Partners:
RSp1035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0276 family.
 
  
 0.989
RSp1036
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.966
RSp1037
Probable transmembrane protein.
 
  
 0.946
RSc0249
Putative calcium binding hemolysin protein.
   
    0.678
hrpW
Hrpw transmembrane protein.
   
    0.678
RSp0176
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.654
trbE
Probable conjugal transfer protein trbe.
   
    0.650
trbI
Probable conjugal transfer trbi transmembrane protein.
   
    0.511
trbG
Probable conjugal transfer lipoprotein trbg.
   
    0.511
hrcV
Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
   
    0.495
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.