STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1036Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (256 aa)    
Predicted Functional Partners:
RSp1035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0276 family.
  
 0.998
RSp1037
Probable transmembrane protein.
  
 0.992
RSp1034
Probable signal peptide protein.
 
  
 0.966
RSp1038
Probable lipoprotein transmembrane.
      0.812
RSc0240
Probable transmembrane protein.
  
  
 0.509
RSc2500
Probable transmembrane protein.
  
  
 0.509
RSc0209
Hypothetical transmembrane protein.
  
  
 0.502
cnrT
Probable cobalt-nickel-resistance system transmembrane protein.
  
     0.463
RSc0249
Putative calcium binding hemolysin protein.
   
    0.422
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
  
     0.419
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.