STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1037Probable transmembrane protein. (162 aa)    
Predicted Functional Partners:
RSp1035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0276 family.
  
 0.992
RSp1036
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
 0.992
RSp1034
Probable signal peptide protein.
 
  
 0.946
RSp1038
Probable lipoprotein transmembrane.
 
    0.820
RSc0034
Probable ecf-family rna polymerase sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.587
RSc1961
Putative aaa atpase; protein.
  
  
  0.572
RSc2619
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.512
msrQ
Probable transmembrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...]
  
  
 0.501
RSc1259
Putative signal peptide protein.
  
     0.421
RSc1062
Probable transmembrane protein.
  
     0.403
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.