Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSp1039Putative outer membrane channel lipoprotein transmembrane. (485 aa)    
Predicted Functional Partners:
RSp1041
Probable cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.826
RSp1040
Putative cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.811
RSp1197
Putative membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.678
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 
 0.524
RSp1042
Probable two-component response regulator transcription regulator protein.
   
   0.517
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 
 0.515
RSp1043
Probable two-component sensor histidine kinase transcription regulator protein.
     
 0.502
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 
 0.500
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.497
RSp1113
Probable transmembrane multidrug-efflux system lipoprotein transmembrane.
 
   0.467
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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