STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
RSp1048Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (779 aa)    
Predicted Functional Partners:
fdhD
Probable formate dehydrogenase associated protein (fdhd protein); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
 0.970
RSc2376
Putative ferredoxin protein.
  
 
 0.964
RSc2372
Probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein.
  
 
 0.906
RSp1049
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSp1047
Probable transporter transmembrane protein.
     0.768
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
   
 
 0.712
RSc2370
Putative formate dehydrogenase, gamma subunit; transmembrane protein.
  
 
 0.663
RSc3256
Putative cytochrome c-related protein.
   
 
 0.628
tuf1
Probable elongation factor tu (ef-tu protein); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.621
tuf2
Probable elongation factor tu (ef-tu protein).
   
 
 0.621
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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