STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RSp1055Probable transmembrane aldehyde dehydrogenase oxidoreductase protein. (499 aa)    
Predicted Functional Partners:
RSp1056
Probable beta-alanine--pyruvate aminotransferase (omega-amino acid--pyruvate aminotransferase) protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.976
mmsB
Probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; Belongs to the HIBADH-related family.
 
 
 0.929
goaG
Probable 4-aminobutyrate aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.927
prpC
Probable methylcitrate synthase (citrate synthase 2) protein; Belongs to the citrate synthase family.
  
 0.927
RSc0475
Putative acetyl-coa acyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
RSc1761
Probable acetyl-coa acetyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
RSc0274
Probable acyl coa dehydrogenase oxidoreductase protein.
   
  0.921
RSc1799
Putative dihydrolipoamide acetyltransferase (component e2 of pyruvate dehydrogenase complex) protein.
   
 
 0.918
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.918
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.916
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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