STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1060Putative cog1752, predicted esterase of the alpha-beta hydrolase superfamily transmembrane protein. (377 aa)    
Predicted Functional Partners:
adc
Probable acetoacetate decarboxylase (adc) (aad) protein; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
 
   
 0.859
RSp1059
Probable dehydrogenase/reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.833
RSp1220
Probable flavoprotein fad oxidoreductase.
 
      0.671
phbC
Probable poly-beta-hydroxybutyrate polymerase transmembrane protein.
 
   
 0.632
acpA
Putative acid phosphatase protein.
  
   
 0.499
RSp1650
Probable cog5662, predicted transmembrane transcriptional regulator (anti-sigma factor) transcription regulator protein.
  
     0.469
RSc0980
Probable transmembrane protein.
  
     0.445
RSc3315
Putative transmembrane protein.
 
     0.429
RSc1634
Putative pha accumulation regulator dna-binding protein.
 
     0.428
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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