STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1061Putative glucose-fructose oxidoreductase; oxidoreductase protein. (383 aa)    
Predicted Functional Partners:
iolD
Putative acetolactate synthase protein; Belongs to the TPP enzyme family.
  
  
 0.694
iolB
Putative myo-inositol catabolism protein.
  
  
 0.692
RSp1076
Putative glucose-fructose oxidoreductase oxidoreductase protein.
  
     0.580
RSc1247
Probable sugar phosphate isomerases/epimerases protein.
 
  
 0.539
lysS
Putative lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.523
iolH
Putative protein implicated in myo-inositol catabolique pathway.
 
  
 0.521
RSp1400
Probable 4-hydroxyphenylpyruvate dioxygenase-related protein.
  
  
 0.508
iolC
Probable transferase kinase protein.
  
  
 0.490
rfbB
Probable dtdp-glucose 4,6-dehydratase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.479
scrB
Putative sucrose-6-phosphate hydrolase (sucrase invertase) protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
   
 0.472
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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