STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1062Probable ferrisiderophore receptor protein. (695 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
  
  
 0.938
RSp1035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0276 family.
   
    0.909
RSp1034
Probable signal peptide protein.
   
  
 0.849
RSp0642
Probable non ribosomal peptide synthetase protein.
 
  
 0.743
RSc2814
Putative prolyl 4-hydroxylase alpha subunit homologue oxidoreductase protein.
  
  
 0.717
RSc1811
Putative siderophore synthetase protein.
  
  
 0.711
trbE
Probable conjugal transfer protein trbe.
   
    0.685
hrcV
Hrp conserved hrcv transmembrane protein; Involved in the secretion of PopA, a proteinaceous elicitor of the hypersensitivity response in plants; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
   
    0.685
RSp1036
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.685
trbG
Probable conjugal transfer lipoprotein trbg.
   
    0.682
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.