STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadG2Putative cog4961, flp pilus assembly transmembrane protein. (163 aa)    
Predicted Functional Partners:
cpaE2
Probable pilus assembly protein.
 
  
 0.960
cpaA2
Probable prepilin peptidase transmembrane protein.
  
 0.958
tadB2
Probable pilus assembly tadb transmembrane protein.
 
  
 0.946
cpaB2
Probable flp pilus assembly cpab; signal peptide protein.
 
    0.940
tadC2
Probable pilus assembly tadc transmembrane protein.
 
    0.924
cpaF2
Probable secretion atpase protein.
 
  
 0.899
cpaC2
Probable pilus assembly, secretin cpac signal peptide protein; Belongs to the bacterial secretin family.
 
  
 0.891
tadD2
Probable pilus assembly tadd transmembrane protein.
 
  
 0.877
cpaE1
Putative pilus assembly protein.
 
  
 0.836
RSp1080
Probable transmembrane protein.
 
    0.824
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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