STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1098Putative hns-like transcription regulator protein. (102 aa)    
Predicted Functional Partners:
RSc2765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.702
ftsN
Probable cell division ftsn transmembrane protein.
  
     0.561
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
  
     0.559
RSc3098
Putative gcn5-related n-acetyltransferase; protein.
  
     0.545
RSc2234
Probable transmembrane protein.
  
     0.497
RSc0067
Putative thioredoxin protein.
  
     0.491
gspJ
Probable general secretory pathway j transmembrane protein.
  
     0.484
RSc2385
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.475
RSc0157
Hypothetical dihydroneopterin aldolase; protein.
  
     0.467
RSc2404
Hypothetical signal peptide protein.
  
     0.452
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.