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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEProbable udp-glucose 4-epimerase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (341 aa)    
Predicted Functional Partners:
galU1
Probable utp--glucose-1-phosphate uridylyltransferase protein.
  
 0.951
galU2
Probable utp--glucose-1-phosphate uridylyltransferase udp-glucose pyrophosphorylase protein.
  
 0.951
ugd
Probable udp-glucose 6-dehydrogenase (ugd) oxidoreductase protein.
  
 
 0.945
wecA
Probable undecaprenyl phosphate n-acetylglucosaminyltransferase transmembrane protein.
  
  
 0.752
RSp1100
Putative possible signal sensing transmembrane protein.
   
   0.642
RSc0523
Putative histidinol phosphatase or related phosphatase protein.
    
 0.639
rfbB
Probable dtdp-glucose 4,6-dehydratase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
0.603
RSp1102
Probable integrase/recombinase protein.
      0.597
phoR
Probable phosphate regulon two-component sensor kinase transcription regulator protein.
      
 0.593
mraZ
Hypothetical protein mraz; Belongs to the MraZ family.
      
 0.590
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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