STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
otsBProbable trehalose-phosphatase protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (262 aa)    
Predicted Functional Partners:
otsA
Probable alpha,alpha-trehalose-phosphate synthase protein; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
 
 0.999
RSp0731
Probable trehalose-6-phosphate synthase (alpha,alpha-trehalose-phosphate synthase udp-forming) protein.
 
 0.998
RSp0237
Putative 1,4-alpha-glucan branching enzyme protein.
 
 0.994
treA
Probable periplasmic alpha,alpha-trehalase signal peptide protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system.
 
 0.993
RSp0240
Putative glycosidase possibly involved in trehalose metabolism protein.
 
 
 0.976
RSc1458
Putative glucoamylase or related glycosyl hydrolase protein.
   
 0.914
treY
Probable maltooligosyl trehalose synthase transmembrane protein.
 
  
 0.829
RSc2080
Probable transmembrane protein.
   
    0.730
rpoN1
Probable rna polymerase sigma n (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.690
rpoN2
Probable rna polymerase sigma n (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.690
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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