STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
otsAProbable alpha,alpha-trehalose-phosphate synthase protein; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family. (465 aa)    
Predicted Functional Partners:
otsB
Probable trehalose-phosphatase protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.999
RSp0731
Probable trehalose-6-phosphate synthase (alpha,alpha-trehalose-phosphate synthase udp-forming) protein.
  
  
0.914
galU1
Probable utp--glucose-1-phosphate uridylyltransferase protein.
    
 0.913
galU2
Probable utp--glucose-1-phosphate uridylyltransferase udp-glucose pyrophosphorylase protein.
    
 0.913
treY
Probable maltooligosyl trehalose synthase transmembrane protein.
 
  
 0.848
RSc1458
Putative glucoamylase or related glycosyl hydrolase protein.
 
   
 0.789
RSp0237
Putative 1,4-alpha-glucan branching enzyme protein.
 
  
 0.740
RSp0240
Putative glycosidase possibly involved in trehalose metabolism protein.
 
  
 0.660
ohr
Probable organic hydroperoxide resistance protein.
  
    0.608
RSp1106
Putative transcription regulator protein.
       0.581
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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