STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrProbable organic hydroperoxide resistance protein. (141 aa)    
Predicted Functional Partners:
RSp1106
Putative transcription regulator protein.
  
 0.914
dps
Putative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.658
RSp1108
Probable lipase signal peptide protein.
  
    0.633
otsA
Probable alpha,alpha-trehalose-phosphate synthase protein; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.612
otsB
Probable trehalose-phosphatase protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.601
RSp0386
Putative transcription regulator protein.
  
 0.598
RSc0588
Probable signal transduction protein eal-ggdef domains.
   
    0.465
RSc0621
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.465
RSp1155
Probable signal transduction protein eal-ggdef domains.
   
    0.465
RSc1154
Putative aldo/keto reductase; oxidoreductase protein.
  
    0.451
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.