STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1112Probable transmembrane multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (438 aa)    
Predicted Functional Partners:
RSp1113
Probable transmembrane multidrug-efflux system lipoprotein transmembrane.
 
 
 0.944
RSp1114
Putative outer-membrane drug efflux protein.
 
 
 0.876
acrB
Putative acriflavin resistance transmembrane protein.
 
 
 0.831
mexD
Probable multidrug efflux system transmembrane protein.
 
 
 0.831
RSp0818
Probable drug efflux transmembrane protein.
 
 
 0.830
RSp0669
Probable outer membrane chanel lipoprotein.
  
   0.638
RSp1599
Putative outer membrane drug efflux lipoprotein.
  
   0.596
RSp0442
Probable channel-forming component of a multidrug resistance efflux pump protein.
  
 
 0.580
RSp1456
Putative outer membrane lipoprotein.
  
   0.579
RSp0530
Putative cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.538
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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