STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1127Probable transmembrane abc transporter protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (232 aa)    
Predicted Functional Partners:
glpK
Probable glycerol kinase (atp:glycerol 3-phosphotransferase)(glycerokinase) (gk) protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.949
glpD
Probable glycerol-3-phosphate dehydrogenase oxidoreductase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.914
glpQ
Putative glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein.
  
 
 0.893
RSc3104
Probable calcium-binding signal peptide protein.
   
 
 0.859
arsC
Putative arsenate reductase (arsenical pump modifier) protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.809
ndk
Probable nucleoside diphosphate kinase (ndk) (ndp kinase)(nucleoside-2-p kinase) protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.730
dnaJ
Probable chaperone protein dnaj; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...]
   
 
 0.719
arsR
Putative arsenical resistance operon repressor transcription regulator protein.
 
   
 0.678
RSc2158
Putative protein phosphatase 2c-like.
    
 
 0.676
RSc0217
Putative aldo/keto reductase; oxidoreductase protein.
   
 
 0.607
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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