Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc0952 | RSp1130 | RSc0952 | RSp1130 | Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Putative type III effector protein. | 0.445 |
| RSc0952 | nnrD | RSc0952 | RSc1720 | Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.806 |
| RSc0952 | rph | RSc0952 | RSc2159 | Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Probable ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.509 |
| RSc2779 | RSp1130 | RSc2779 | RSp1130 | Putative ribonuclease protein. | Putative type III effector protein. | 0.484 |
| RSc2779 | rph | RSc2779 | RSc2159 | Putative ribonuclease protein. | Probable ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.940 |
| RSp1130 | RSc0952 | RSp1130 | RSc0952 | Putative type III effector protein. | Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | 0.445 |
| RSp1130 | RSc2779 | RSp1130 | RSc2779 | Putative type III effector protein. | Putative ribonuclease protein. | 0.484 |
| RSp1130 | dbpA | RSp1130 | RSc0622 | Putative type III effector protein. | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | 0.445 |
| RSp1130 | nnrD | RSp1130 | RSc1720 | Putative type III effector protein. | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.829 |
| RSp1130 | rhlE1 | RSp1130 | RSc0539 | Putative type III effector protein. | Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | 0.445 |
| RSp1130 | rhlE2 | RSp1130 | RSc2211 | Putative type III effector protein. | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | 0.445 |
| RSp1130 | rnr | RSp1130 | RSc1228 | Putative type III effector protein. | Probable exoribonuclease rnase r (vacb protein); 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.484 |
| RSp1130 | rph | RSp1130 | RSc2159 | Putative type III effector protein. | Probable ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.468 |
| dbpA | RSp1130 | RSc0622 | RSp1130 | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Putative type III effector protein. | 0.445 |
| dbpA | nnrD | RSc0622 | RSc1720 | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.806 |
| dbpA | rph | RSc0622 | RSc2159 | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | Probable ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.509 |
| nnrD | RSc0952 | RSc1720 | RSc0952 | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | 0.806 |
| nnrD | RSp1130 | RSc1720 | RSp1130 | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | Putative type III effector protein. | 0.829 |
| nnrD | dbpA | RSc1720 | RSc0622 | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family. | 0.806 |
| nnrD | rhlE1 | RSc1720 | RSc0539 | Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | 0.806 |
page 1 of 2