STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1139Probable vgr-related protein. (760 aa)    
Predicted Functional Partners:
RSp1138
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.930
RSp1137
Putative rhs-related transmembrane protein.
  
 0.917
RSp0743
Hypothetical uncharacterised conserved protein ucp028301.
 
  
 0.902
RSp0745
Hypothetical protein of unknown function duf796.
 
  
 0.899
RSp0748
Hypothetical protein of unknown function duf1305.
 
  
 0.896
RSp0744
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.862
RSp0739
Probable transmembrane protein.
  
 0.841
RSp0747
Hypothetical protein of unknown function duf879, bacterial.
 
  
 0.837
RSp0746
Hypothetical protein of unknown function duf1316.
 
  
 0.834
RSp0749
Putative clpa/b-type chaperone protein; Belongs to the ClpA/ClpB family.
 
  
 0.834
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.