STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1148Putative predicted hydrolases or acyltransferase (alpha/beta hydrolase superfamily) signal peptide protein. (412 aa)    
Predicted Functional Partners:
RSp1147
Putative dinucleotide-binding enzyme oxidoreductase protein.
 
     0.802
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.692
RSp1146
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
     0.608
RSp1229
Probable alpha/beta hydrolase; protein.
  
     0.466
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.452
RSc1806
Probable polyketide synthase protein.
  
 
 0.442
RSc1810
Probable polyketide synthase protein.
  
 
 0.437
RSp0328
Probable transcription regulator protein.
  
     0.405
RSc2596
Putative amidase related to nicotinamidase; protein.
  
   0.403
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.