STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1155Probable signal transduction protein eal-ggdef domains. (915 aa)    
Predicted Functional Partners:
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.867
RSp0255
Probable methyl-accepting chemotaxis transducer transmembrane protein.
   
 
 0.807
aer
Probable aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein.
  
 
 0.807
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.804
RSc0375
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.774
RSp1203
Probable signal transduction protein ggdef domain.
 
 
0.767
RSp1208
Probable signal transduction protein eal-ggdef domains.
 
 
0.763
RSc0510
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.761
RSp1051
Probable signal transduction protein eal domain.
 
 
0.755
RSp1097
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.749
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.