STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1157Probable transcription regulator protein. (324 aa)    
Predicted Functional Partners:
RSp1156
Probable signal peptide protein.
      0.870
RSp1158
Hypothetical protein of unknown function duf1272.
       0.773
RSc1098
Probable transcriptional regulatory dna-binding transcription regulator protein.
 
 
 0.641
phoB
Probable phosphate regulon two-component response regulator transcription regulator protein.
   
  
 0.532
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
      
 0.524
prhA
Outer membrane receptor prha signal peptide protein.
  
   
 0.509
prhJ
Transcription regulator prhj transcription regulator protein.
   
  
 0.476
RSc1832
Probable transcription regulator protein.
  
     0.471
RSp1159
Probable universal stress protein related nucleotide-binding protein.
       0.440
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.403
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.