STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1162Probable two-component sensor histidine kinase transcription regulator protein. (512 aa)    
Predicted Functional Partners:
RSp1161
Probable two-component response regulator transcription regulator protein.
 0.997
RSp0314
Probable two component response regulator transcription regulator protein.
 
 
 0.785
RSc3404
Probable response regulator transcription regulator protein.
 
 
 0.736
RSp0917
Probable two component response regulator transcription regulator protein.
 
 
 0.717
RSp1554
Probable two-component response regulator transcription regulator protein.
 
 
 0.711
RSc3064
Probable response regulator transcription regulator protein.
 
 
 0.710
RSc3392
Probable response regulator transcription regulator protein.
 
 
 0.701
RSp1196
Probable two component response regulator transcription regulator protein.
 
 0.678
RSc2935
Putative response regulator transcription regulator protein.
 
 
 0.666
RSp1042
Probable two-component response regulator transcription regulator protein.
 
 0.660
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.